BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027B12LP1|AL428681
(878 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1775 1629 0.0
>3x_Contig1775
Length = 26320
Score = 1629 bits (817), Expect = 0.0
Identities = 846/859 (98%), Gaps = 1/859 (0%)
Strand = Plus / Plus
Query: 20 aaatgtttctcattcagcaatgctttttttaaacactaatccaactggaccagctccgat 79
|||||||||||||||||||| |||||| |||||| || ||||||||||||||||||||||
Sbjct: 20199 aaatgtttctcattcagcaaggcttttgttaaac-ctgatccaactggaccagctccgat 20257
Query: 80 gactgcaacgcggcgaattttatcaggattcacttttattaatctaatttkagtaggtct 139
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 20258 gactgcaacgcggcgaattttatcaggattcacttttattaatctaatttgagtaggtct 20317
Query: 140 cattttttatagtgattgckcgccctcgtaacakactttcgtaaatccagtgttaatctt 199
||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 20318 cattttttatagtgattgcgcgccctcgtaacagactttcgtaaatccagtgttaatctt 20377
Query: 200 tggaaggttgacaatttctcagctgcctggtcagaaattgtatttaattggcttgtagcc 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20378 tggaaggttgacaatttctcagctgcctggtcagaaattgtatttaattggcttgtagcc 20437
Query: 260 tatgtattgtaagtbccactttttttaaaactggatactgcgatctgaaaggatgagttt 319
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20438 tatgtattgtaagtgccactttttttaaaactggatactgcgatctgaaaggatgagttt 20497
Query: 320 ggcagttaattataatbttaggaaactttcgaaatctgtctccgatatatcgatataggg 379
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20498 ggcagttaattataatgttaggaaactttcgaaatctgtctccgatatatcgatataggg 20557
Query: 380 gagttccttgattgaagctgctagatttatctcatcccaatctcttgttatatacsttta 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 20558 gagttccttgattgaagctgctagatttatctcatcccaatctcttgttatatacgttta 20617
Query: 440 ttctctttagaccatcatgttttttcattcgatgaacggactttggctgaatcaagtagt 499
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20618 tgctctttagaccatcatgttttttcattcgatgaacggactttggctgaatcaagtagt 20677
Query: 500 ttaaaaatccgttgtggctttatcacgtgactaamatcactgcatatagacaccgtgaac 559
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 20678 ttaaaaatccgttgtggctttatcacgtgactaaaatcactgcatatagacaccgtgaac 20737
Query: 560 caactcactgctagaactgtgtggggtgtgtgttgaagctttagaagatggtgttatctg 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20738 caactcactgctagaactgtgtggggtgtgtgttgaagctttagaagatggtgttatctg 20797
Query: 620 atcaatatctagatgacatcttagagatactgtagttatcatgtgatggtttttgtggac 679
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20798 atcaatatctagatgagatcttagagatactgtagttatcatgtgatggtttttgtggac 20857
Query: 680 atgagggacctactgtgtcttattaatccataaaagatcgtaagttcctaatacattggg 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20858 atgagggacctactgtgtcttattaatccataaaagatcgtaagttcctaatacattggg 20917
Query: 740 tactaaagtcatagcatcattattaattgataagttgctcgagtacatctcgaataggaa 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20918 tactaaagtcatagcatcattattaattgataagttgctcgagtacatctcgaataggaa 20977
Query: 800 agtgaagtggtgggaagaataaatatctatgtctatatctatatatgcatatatggttgt 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20978 agtgaagtggtgggaagaataaatatctatgtctatatctatatatgcatatatggttgt 21037
Query: 860 ataatggtatcggtgatag 878
|||||||||||||||||||
Sbjct: 21038 ataatggtatcggtgatag 21056
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5923
Number of Sequences: 1807
Number of extensions: 5923
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 878
length of database: 10,358,551
effective HSP length: 16
effective length of query: 862
effective length of database: 10,329,639
effective search space: 8904148818
effective search space used: 8904148818
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)